
Acquiring Spectra from the Sequence Control Panel
Voyager
™
Biospectrometry
™
Workstation User’s Guide 6-67
6
Creating settings
(.SET) files
Create settings (.SET) files in the Data Explorer software if
you will be specifying Internal or Internal-Update calibration, or
if you want peak detection settings other than default settings
stored with the data file.
The .SET file can also apply monoisotopic peak filtering.
NOTE: If you do not specify a Pre-Macro that performs
peak deisotoping, or do not set monoisotopic peak filtering,
set the Mass Tolerance for Reference Matching in
Autocalibration settings narrow enough to ensure that the
monoisotopic peak is correctly identified before calibration.
For information, see the
Data Explorer Software User’s Guide
:
• Section 1.4.2, Customizing Processing
and Graphic Settings (.SET)
• Section 3.2.3, Setting Peak Detection Parameters
• Section 3.3.3, Sorting, Filtering, and Printing the Peak
List
• Section 5.4.2, Importing and Specifying
Automatic Calibration Settings
6.7.3 Creating a Sequence
This section includes:
• Setting General Sequence parameters
• Creating a run list
Parts of a
sequence
A sequence includes:
• General sequence parameters—Apply to all entries in
the run list, described in Section 6.7.3.1, Setting General
Sequence Parameters.
• Run list parameters—Apply to individual entries in the
run list, described in Section 6.7.3.2, Creating a Run List.
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